package builder

I'm trying to package a look that i made with a PC license. But when i finalize the package and open it in another instance of vam its missing the hair, clothes, custom face morph. Everything except for the pose and some other random morphs. I don't know what Im doing wrong and Im so frustrated...

I'm trying to create a basic male atom template. I did a fresh install of VaM and deleted everything I didn't need in the Addons folder including MacGruber's Life plugin. I also zeroed out all the active morphs. Then when loading my base Atom and deleting everything under Plugins, when I save...

I want to permanently delete some scenes and dependencies from VAM and stop them from showing up in the "Scan hub for missing reference packages" area of the hub. I've tried deleting from my files and deleting the package from the "Package Builder". How can I do this? or Can you even do this...